Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: bba6c580ab88e077f6aa2c2ee7c73159f3f9156e
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9