Explore Workflows

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr.cwl

Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/waltz/waltz_workflow_all_bams.cwl

Branch/Commit ID: daba08457dd53fb81d11acb274c29a77b6122316

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_magicblast.cwl

Branch/Commit ID: deb45393512c8eb82de1adec82982b439933d7cd

Compute average structure for all averaged structures corresponding to UniProt domain instances cross-mapped from Pfam/CATH to a CATH/Pfam family. First computes average per UniProt domain instance and then average all averaged structures per Pfam family.

https://gitlab.inria.fr/capsid.public_codes/CroMaSt.git

Path: Tools/other_avg_subwf.cwl

Branch/Commit ID: 9f3832867eab6c7a6363f8ca594a4bcf2ff7e96f

todo

https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/relabel-and-merge.cwl

Branch/Commit ID: 989ccc28212983c2ed00e9461639fdf4df6481d4

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_sort.cwl

Branch/Commit ID: de9cb009f8fe0c8d5a94db5c882cf21ddf372452

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl

Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/revsort.cwl

Branch/Commit ID: 5f27e234b4ca88ed1280dedf9e3391a01de12912

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/marianas/collapsed_fastq_to_bam.cwl

Branch/Commit ID: e7754fb4d3cd14068eef0c498cc5c6fcf53dc31f

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/waltz/waltz_workflow_all_bams.cwl

Branch/Commit ID: e7754fb4d3cd14068eef0c498cc5c6fcf53dc31f