Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph sec-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/sec-wf.cwl

Branch/Commit ID: 7dec97bb8f0bc2d9e9eb710faf41f2e98cc7cdda
workflow graph PGAP Pipeline, simple user input, PGAPX-134

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph Align reference proteins plane complete workflow

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_protein_alignment.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: dcbbce152fbff2637f102471fb80318244492853
workflow graph cwlsite.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/site/cwlsite.cwl

Branch/Commit ID: e8b3565a008d95859fc44227987a54e6a53a8c29
workflow graph rw-flow.cwl

run multiple rw stages sequentially using earlier step output as later stage input_bam

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/rw-flow.cwl

Branch/Commit ID: d20382adfe7285cb517a25d95d2bcb7586546e23
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: ffd73951157c61c1581d346628d75b61cdd04141
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616
workflow graph genomics-workspace-transcript.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-transcript.cwl

Branch/Commit ID: 58b23bf2d10154a5f2296df8fce496de4cecffef