Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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tt_hmmsearch_wnode.cwl
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![]() Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: f10de890d1d2271299931349fa8aea660acef4ee |
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02-trim-pe.cwl
ChIP-seq 02 trimming - reads: PE |
![]() Path: v1.0/ChIP-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: ebd63f705d0fde7290e42c8300d5420c25cfbfe3 |
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Unaligned bam to sorted, markduped bam
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![]() Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec |
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Creates FASTA file from BED coordinates
This workflow creates FASTA file from BED coordinates |
![]() Path: workflows/File-formats/fasta-from-bed.cwl Branch/Commit ID: 06501cfc314e36749043431e67c2990966b452e0 |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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![]() Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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nestedworkflows.cwl
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![]() Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl Branch/Commit ID: 9de553c3a57894808a5af3567b5bf9263d3ea829 |
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Seed Protein Alignments
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![]() Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 9ff3e17888a15f4691ba82380472317214e20a1c |
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pipeline-se.cwl
DNase-seq pipeline - reads: SE |
![]() Path: v1.0/DNase-seq_pipeline/pipeline-se.cwl Branch/Commit ID: 6e008c1170ef818b6c4c63f0eec7baa4f7be7b3c |
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nestedworkflows.cwl
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![]() Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl Branch/Commit ID: 1f49ff5fa7d01081378afdbf3eb0d388f744ca6d |
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Run genomic CMsearch
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![]() Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: f10de890d1d2271299931349fa8aea660acef4ee |