Explore Workflows
View already parsed workflows here or click here to add your own
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transcriptome_assemble.cwl
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Path: workflow/transcriptome_assemble/transcriptome_assemble.cwl Branch/Commit ID: develop |
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createindex_singlevirus.cwl
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Path: workflow/createindex_singlevirus.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 71d9c83 |
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contam_euk.cwl
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Path: cwl/workflow/contam_euk.cwl Branch/Commit ID: master |
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main.cwl
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Path: main.cwl Branch/Commit ID: main |
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tRNA_selection.cwl
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Path: tools/tRNA_selection.cwl Branch/Commit ID: 0fed1c9 |
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Immunotherapy Workflow
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Path: definitions/pipelines/immuno.cwl Branch/Commit ID: low-vaf |
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checker_workflow_wrapping_workflow.cwl
This demonstrates how to wrap a \"real\" workflow with a checker workflow that runs both the tool and a tool that performs verification of results |
Path: checker_workflow_wrapping_workflow.cwl Branch/Commit ID: 1.3.0 |
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find_hotspots_in_normals.cwl
Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups |
Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master |
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workflow.cwl
This is a sample workflow that downloads several files and prcoesses them |
Path: workflow/cwl/workflow.cwl Branch/Commit ID: master |
