Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: bffea7fd5e864c5221c13a815d00d0a2fad178cc
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 2f65fc96207a71b1cda4e246f808bed056608cd0
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 31602b94b34ff55876147c7299e1bec47e8d1a31
	kmer_gc_extract_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_gc_extract_wnode.cwl Branch/Commit ID: e668f9c4047f1971ae53040a5af3eccc4bfc3c53
	ST520115.cwl	https://github.com/Marco-Salvi/dtc51.git Path: ST520115.cwl Branch/Commit ID: 272db37d2b8108a146769f0fb0383bb824c9788f
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 2f65fc96207a71b1cda4e246f808bed056608cd0
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
	fillout_workflow.cwl Workflow to run GetBaseCountsMultiSample fillout on a number of bam files with a single maf file	https://github.com/mskcc/pluto-cwl.git Path: cwl/fillout_workflow.cwl Branch/Commit ID: 342e6f1f4f7a3839e579fbe96ccc8d6f7a61ac77
	Filter Protein Seeds I; Find ProSplign Alignments I	https://github.com/ncbi-gpipe/pgap.git Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: 0b036c0e52935eeb413c784e14275b87d5eb028e