Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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sc_atac_seq_initial_analysis.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_initial_analysis.cwl Branch/Commit ID: a33bc8a |
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myAIWorkflow3.cwl
This CWL workflow outlines the steps for setting up and executing an experiment based on objectives, SOP references, parameters, and experimental design. Version: 1.0 Description: Workflow for executing and tracking experiments. Includes validation and logging steps. |
https://github.com/pascmont/cwltest.git
Path: myAIWorkflow3.cwl Branch/Commit ID: main |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: cee6caf |
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docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl
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https://github.com/VisIVOLab/VisIVOCWL.git
Path: Workflow_4/docker_VisIVO_ImpFilterView_Workflow_GADGET_PD.cwl Branch/Commit ID: main |
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01-qc-pe.cwl
ChIP-seq 01 QC - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/01-qc-pe.cwl Branch/Commit ID: master |
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Salmon quantification, FASTQ -> H5AD count matrix
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https://github.com/lux563624348/WDL-HuBMAP-salmon-rnaseq.git
Path: steps/salmon-quantification.cwl Branch/Commit ID: main |
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analysis-workflow.cwl
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https://github.com/mskcc/pluto-cwl.git
Path: cwl/analysis-workflow.cwl Branch/Commit ID: master |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: master |
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unzipBAMs.cwl
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https://github.com/Kevin-Fang/recall-veritas-pgp.git
Path: unzip/unzipBAMs.cwl Branch/Commit ID: master |
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04-quantification-pe-stranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-pe-stranded.cwl Branch/Commit ID: master |
