Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: a7838a5ca72b25db5c2af20a15f34303a839980e
	segmentation.cwl	https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git Path: steps/segmentation.cwl Branch/Commit ID: 03b8da4ede3afcbf97b4e780c153155f33e76c84
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 22ffe27d9d4a899def7592d75d5871c1856adbdb
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: c18a7e5164cb6b19f06b3d1e869407c118a87f7e
	Pairwise genomic regions intersection Pairwise genomic regions intersection ============================================= Overlaps peaks from two ChIP/ATAC experiments	https://github.com/datirium/workflows.git Path: workflows/peak-intersect.cwl Branch/Commit ID: 1a46cb0e8f973481fe5ae3ae6188a41622c8532e
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32
	protein annotation Proteins - predict, cluster, identify, annotate	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-annotation.workflow.cwl Branch/Commit ID: 662d424d2e433e636f46a79025325d5daaca6271
	sorter.cwl	https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git Path: steps/sorter.cwl Branch/Commit ID: 03b8da4ede3afcbf97b4e780c153155f33e76c84
	kmer_ref_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000