Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	io-union-input-default-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/io-union-input-default-wf.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2
	ATAC.cwl	https://github.com/common-workflow-lab/wdl-cwl-translator.git Path: wdl2cwl/tests/cwl_files/ATAC.cwl Branch/Commit ID: 0a8c54b014101112fa4a2cb5fce5c30133691cae
	import_schema-def.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/import_schema-def.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2
	trim-rnaseq-se-dutp.cwl Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	super-enhancer.cwl Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl)	https://github.com/Barski-lab/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: e89b2c17aa5efccef6ca424dec5a0a021bd8d20c
	trim-rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe-dutp.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	trim-rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-se.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	heatmap.cwl Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension	https://github.com/Barski-lab/workflows.git Path: workflows/heatmap.cwl Branch/Commit ID: e89b2c17aa5efccef6ca424dec5a0a021bd8d20c