Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	1st-workflow.cwl	https://github.com/common-workflow-language/user_guide.git Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl Branch/Commit ID: a29e7eae0006660946fc705a310b37a21a7e1edc
	assm_assm_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 1ce371c7412debef75edf09e8830d74ac987a668
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: b75f4c380deec3d1a6473c8996d7d47fcb5ce7f2
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 2229f26ec424f9ebeb3db7fec3bd3f84a38c7485
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: 7bfe73a708dbf31d037303bb5a8fed1a79984b0f Packed ID: main
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d
	Seed Search Compartments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4