Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 1249b5d4e23d57ca5e3b8ad6d8e5f10ddb019f68
	Compute library complexity This workflow compute library complexity	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b