Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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dedup-2-pass.cwl
run 2-pass dedup: algo LocusCollector + algo Dedup sequentially |
https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/dedup-2-pass.cwl Branch/Commit ID: master |
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5S-from-tablehits.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: master |
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exomeseq.cwl#exomeseq-01-preprocessing.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow Packed ID: exomeseq-01-preprocessing.cwl |
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wgs alignment and tumor-only variant detection
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/wgs.cwl Branch/Commit ID: No_filters_detect_variants |
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workflow.cwl
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https://github.com/ljdursi/cwl-tutorial.git
Path: bioinformatics/tools/workflow.cwl Branch/Commit ID: master |
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group-isoforms-batch.cwl
Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored. |
https://github.com/mr-c/datirium-workflows.git
Path: tools/group-isoforms-batch.cwl Branch/Commit ID: license_test |
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count-lines15-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines15-wf.cwl Branch/Commit ID: main |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: d3b8e45 |
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Bisulfite alignment and QC
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: downsample_and_recall |
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collate_unique_SSU_headers.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 9c57dba |
