Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/cnv_codex.cwl

Branch/Commit ID: 3bb03c9b
workflow graph vqsr-flow.cwl

run vqsr flow, including vqsr rcal, vqsr apply and plot

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/vqsr-flow.cwl

Branch/Commit ID: master
workflow graph stage_data_workflow.cwl

https://github.com/nci-gdc/htseq-cwl.git

Path: workflows/subworkflows/stage_data_workflow.cwl

Branch/Commit ID: master
workflow graph exome alignment and germline variant detection

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: master
workflow graph Exome QC workflow

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: workflow_exome.cwl
workflow graph scatter-valuefrom-wf6.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf6.cwl

Branch/Commit ID: main
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 0746e12
workflow graph collate_unique_SSU_headers.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 3f85843
workflow graph umi duplex alignment workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: low-vaf
workflow graph repliseq-parta.cwl

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl

Branch/Commit ID: master