Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
workflow.cwl
|
https://github.com/inab/ipc_workflows.git
Path: exome/alignment/workflow.cwl Branch/Commit ID: main |
|
|
|
sc_atac_seq_initial_analysis.cwl
|
https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/sc_atac_seq_initial_analysis.cwl Branch/Commit ID: develop |
|
|
|
Whole genome alignment and somatic variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: master |
|
|
|
Filter single sample sv vcf from depth callers(cnvkit/cnvnator)
|
https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: low-vaf |
|
|
|
RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 43d2fb8 |
|
|
|
RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: ca6ca613 |
|
|
|
LodSeq
LodSeq performs the genetic linkage analysis across families, by computing lod-scores given a gvcf file and a related tfam pedigree file. |
https://github.com/CNRGH/WMS-benchmark.git
Path: workflows/cwltoil/lodseq.cwl Branch/Commit ID: master |
|
|
|
revcomp_with_rename.cwl
|
https://github.com/alexbarrera/GGR-cwl.git
Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl Branch/Commit ID: master |
|
|
|
Trim and reformat reads (single and paired end version)
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: master |
|
|
|
basename-fields-test.cwl
|
https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/basename-fields-test.cwl Branch/Commit ID: main |
