Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4 |
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tt_univec_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
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tt_kmer_top_n.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: fecf185474502599f428158e90edb471dfbfac1b |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: e351f650524b532f85820b8e53855010b35046c2 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89 |
