Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 876a05979fb34a8b68c51618a001149daba0562b
workflow graph RD_Connect

https://github.com/inab/Wetlab2Variations.git

Path: cwl-workflows/demonstrator/workflow_localfiles.cwl

Branch/Commit ID: f91932a1de164c8493db34014aa4e335a4e347dd
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 75271e2a0887d47cca4077b60dd51ac763c09b63
workflow graph wf_clipseqcore_pe_1barcode.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_clipseqcore_pe_1barcode.cwl

Branch/Commit ID: 3a7d6c8fb79fadb0e27c9cf284895ce3eff5e299
workflow graph foreign_screening.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/foreign_screening.cwl

Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
workflow graph adapter for sequence_align_and_tag

Some workflow engines won't stage files in our nested structure, so parse it out here

 https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl

Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa
workflow graph wf_get_peaks_scatter_se.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_scatter_se.cwl

Branch/Commit ID: cbcea2fb2f01383d6b7f3102ee6a76ff100315ef
workflow graph MoveData-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: MoveData-workflow.cwl

Branch/Commit ID: 58b23bf2d10154a5f2296df8fce496de4cecffef