Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 1b9094d70f620bb2e51072dd2150150aa4927439
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: e6c2d955a448225f026a04130443d13661844440
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 4f4448f71645275db5b84eb551990dfe3bf37cbb
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: fe164457f370c2dfec5156f6d6d45818d53cb871 Packed ID: main
	An example tool demonstrating workflows. Note that this is an example and the metadata is not necessarily consistent.	https://github.com/eritema/cwlExamples.git Path: Example15/ex15.cwl Branch/Commit ID: af91197fa17354606c6c531f1868863971187325
	cache_test_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 520acbfb82455c4bdabd5f2ea24842804e1c9f58
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: 29bf638904709cfbf10908adcd51ba4886ace94a