Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	mut.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut.cwl Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883
	exome alignment and germline variant detection, with optitype for HLA typing	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
	EMG pipeline v3.0 (single end version)	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7
	kmer_ref_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: da35c7b700912dd3643e3dd2c5c96b7be3a4edad
	count-lines8-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 1e3f5404b7d5af02e3dec0faea31352111ad7cd8
	Subworkflow to allow calling cnvkit with cram instead of bam files	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 295e7b7f51727c0f2d6cc86ce817449b2e8dba3c
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 258bd4353ad1ca7790b3ae626bf42ab8194e7561
	gcaccess_from_list	https://github.com/ncbi/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	count-lines8-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e