Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph pipeline-fastq2vcf-parallel-bwa.cwl

DNAseq pipeline from fastq to vcf

 https://github.com/Sentieon/Sentieon-cwl.git

Path: pipeline/pipeline-fastq2vcf-parallel-bwa.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/fstrozzi/scalability-reproducibility-chapter.git

Path: CWL/workflow.cwl

Branch/Commit ID: master
workflow graph rna-seq-pipeline.cwl

https://github.com/sbg/sbg_dockstore_tools.git

Path: gtex-rnaseq-pipeline/rna-seq-pipeline.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 5833078
workflow graph functional analysis prediction with InterProScan

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: 2104dc3
workflow graph CODEX analysis pipeline using Cytokit

https://github.com/hubmapconsortium/codex-pipeline.git

Path: steps/ometiff_second_stitching.cwl

Branch/Commit ID: 1c73942
workflow graph 04-quantification.cwl

STARR-seq 04 quantification

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/04-quantification.cwl

Branch/Commit ID: master
workflow graph hisat2-cufflinks_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/hisat2-cufflinks/single_end/hisat2-cufflinks_wf_se.cwl

Branch/Commit ID: master
workflow graph qc_workflow.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/QC/qc_workflow.cwl

Branch/Commit ID: 0.0.33_dmp
workflow graph aggregate_visualize

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: aggregate_visualize.cwl