Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	3stepWorkflow.cwl	https://github.com/giannisdoukas/CWLJNIKernel.git Path: tests/cwl/3stepWorkflow.cwl Branch/Commit ID: a19b0939b81a2a0875dc79055399028065f8a062
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	step-valuefrom2-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788
	echo-wc.workflowstep.cwl	https://github.com/NLeSC/scriptcwl.git Path: tests/data/echo-wc.workflowstep.cwl Branch/Commit ID: d2dcfa0686eaa893dd4b3efbd232e9bd1e15194d
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd