Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	SetArrayElementCoordinates Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system).	https://github.com/gammasim/workflows.git Path: workflows/SetArrayElementCoordinates.cwl Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 9c0b1497c467393e1a54735575043dced73e95c4
	SetGeomagneticField Calculate geomagnetic field parameters for a given site and date.	https://github.com/gammasim/workflows.git Path: workflows/SetGeomagneticField.cwl Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
	Krona	https://github.com/EBI-Metagenomics/emg-viral-pipeline.git Path: cwl/src/Tools/Krona/krona_swf.cwl Branch/Commit ID: aad5474411ea31449b3e8a26eeed8920dd07fa17
	mergeAndMarkBams_4_1_3.cwl	https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git Path: janis_pipelines/wgs_somatic/cwl/tools/mergeAndMarkBams_4_1_3.cwl Branch/Commit ID: d1bcf010d5c39d5fc01b8862db4f258df7d4f65d
	helloworld.cwl	https://github.com/reanahub/reana-demo-helloworld.git Path: workflow/cwl/helloworld.cwl Branch/Commit ID: 39d64e14294db8ccf9fe0b256231d0a819f53cd4
	bacterial_orthology	https://github.com/ncbi/pgap.git Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
	bwameth_mulitlib.cwl	https://github.com/ifishlin/Benchmarking_CWL.git Path: workflows/bwameth/bwameth_mulitlib.cwl Branch/Commit ID: 1416ade270d1b990087e39c6680464c12cf564cc