Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph qiime2 Deblur detect/correct sequence data

Option 2: Deblur from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-deblur.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-03-deblur.cwl
workflow graph Dockstore.cwl

https://github.com/GA4GH-DREAM/dockstore-workflow-helloworld.git

Path: Dockstore.cwl

Branch/Commit ID: 1.0.0
workflow graph 03-map-pe-blacklist-removal.cwl

ATAC-seq 03 mapping - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe-blacklist-removal.cwl

Branch/Commit ID: v1.0
workflow graph wf-svcall.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-svcall.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_initial_analysis.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_initial_analysis.cwl

Branch/Commit ID: 68e0cc1
workflow graph GSC Paired Jobs

Serial combination of KnowEnG tools

 https://github.com/knoweng-research/cwl-specification.git

Path: code/workflow.gsc.cwl

Branch/Commit ID: master
workflow graph 03-map-pe-umis.cwl

STARR-seq 03 mapping - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe-umis.cwl

Branch/Commit ID: master
workflow graph ConcordanceCheckerWorkflow.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: vcf-comparator/ConcordanceCheckerWorkflow.cwl

Branch/Commit ID: 1.28.0
workflow graph Varscan Workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: master
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/cmsearch-multimodel-wf.cwl

Branch/Commit ID: assembly