Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ChIP-exo peak caller workflow for single-end samples with no P-Value inflection

This workflow execute peak caller and QC from ChIP-exo for single-end samples with no P-Value inflection

 https://gitlab.com/r78v10a07/cwl-workflow.git

Path: workflows/ChIP-exo/peak_caller-SE-no_inflection.cwl

Branch/Commit ID: 5964544849c8def80fb47813e34ce185205fda94
workflow graph group-isoforms-batch.cwl

Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.

https://github.com/datirium/workflows.git

Path: subworkflows/group-isoforms-batch.cwl

Branch/Commit ID: 7290eb220c90a087dffde04efae3678286aa92d0
workflow graph heatmap-prepare.cwl

Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.

https://github.com/Barski-lab/workflows.git

Path: tools/heatmap-prepare.cwl

Branch/Commit ID: ea2a2ab57710fcf067f67305f3dd6ad29094da1a
workflow graph allele-process-strain.cwl

https://github.com/datirium/workflows.git

Path: subworkflows/allele-process-strain.cwl

Branch/Commit ID: a7b031090f49ab52195a561c162b326998028a35
workflow graph exome alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome.cwl

Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
workflow graph bgzip and index VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546
workflow graph output-arrays-int-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/output-arrays-int-wf.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de
workflow graph output-arrays-file-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/output-arrays-file-wf.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de
workflow graph count-lines10-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines10-wf.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de
workflow graph tt_kmer_top_n.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757