Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1 |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6 |
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SV filtering workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_sv_vcf.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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Long-covid.cwl
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https://github.com/phenoflow/Long-covid---aede7f40-7a21-11ed-b9d2-e51f21933d80.git
Path: Long-covid.cwl Branch/Commit ID: main |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
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step-valuefrom3-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/step-valuefrom3-wf.cwl Branch/Commit ID: a5073143db4155e05df8d2e7eb59d9e62acd65a5 |
