Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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extract_readgroup_fastq_se_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb |
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integrity.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
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extract_readgroup_fastq_se_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: f58bb8121e49a72cf7419a4a38c08f01b931dd37 |
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04-quantification-se-unstranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-se-unstranded.cwl Branch/Commit ID: 4636f2c1a8bcfceeb4b3596ee29e9c06311ed4a1 |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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extract_readgroups_bam.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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QIIME2 Step 1
QIIME2 Import and Demux Step 1 |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: e2dc95d4f12210359360d814382e7201d836dfcf Packed ID: main |
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haplotypecaller.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471 |
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Seed Protein Alignments I
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a |
