Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph helloworld-slurmcern.cwl

https://github.com/reanahub/reana-demo-helloworld.git

Path: workflow/cwl/helloworld-slurmcern.cwl

Branch/Commit ID: 7347d7ed441a442ce25927228b5bc7ac5b8e9a00
workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: 5b498b4c4f17bb8f17e6886aa4c5661d7aba34fc
workflow graph bacterial_kmer

https://github.com/ncbi/pgap.git

Path: bacterial_kmer/wf_bacterial_kmer.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph wf-loadContents2.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents2.cwl

Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/step-valuefrom3-wf.cwl

Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
workflow graph scatter-wf3.cwl#main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf3.cwl

Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94

Packed ID: main
workflow graph count-lines18-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines18-wf.cwl

Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: 4ffbad9ffeab15ec8af5f6f91bd352ef96d1ef77
workflow graph Set Operations for Called Peaks (ChIP/ATAC/C&R/diffbind)

# Set Operations for Peaks This workflow takes as input multiple peak list TSV files (the `iaintersect_result.tsv` output under the \"Files\" output tab) from the ChIP, ATAC, C&R, or diffbind workflows and performs the user-selected set operation on the group. Set operations include intersection, union, difference, and complement. See the tooltip for the `set_operator` input for more details.

 https://github.com/datirium/workflows.git

Path: workflows/filter-peaks-by-overlap.cwl

Branch/Commit ID: d76110e0bfc40c874f82e37cef6451d74df4f908