Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |
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snaptools_create_snap_file.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/snaptools_create_snap_file.cwl Branch/Commit ID: ffcc84c3376c4bd10738e22b7daec6a0aaa37108 |
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ani_top_n
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 0fed1c959ab33112eae46fb02fceffa8bb26b811 |
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GEM peak calling
This workflow execute peak calling using GEM |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/gem.cwl Branch/Commit ID: 33123d6a92bf0038951820d0d2c9cf501ae2ebf6 |
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Merge, annotate, and generate a TSV for SVs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |
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kmer_build_tree
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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kmer_compare_wnode
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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kmer_ref_compare_wnode
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 302e0ae17b8e6776fe94b1b26f1cc47a4e84e8c8 |
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format_rrnas_from_seq_entry
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
