Explore Workflows
View already parsed workflows here or click here to add your own
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Find reads with predicted coding sequences above 60 AA in length
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Path: workflows/orf_prediction.cwl Branch/Commit ID: master |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
Path: tools/heatmap-prepare.cwl Branch/Commit ID: master |
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wf_get_peaks_se.cwl
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Path: cwl/wf_get_peaks_se.cwl Branch/Commit ID: master |
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strelka workflow
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Path: strelka/workflow.cwl Branch/Commit ID: master |
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cnv_exomedepth
CNV ExomeDepth calling |
Path: structuralvariants/cwl/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 1.0.6 |
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count-lines11-wf-noET.cwl
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Path: tests/count-lines11-wf-noET.cwl Branch/Commit ID: main |
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realign-distr.cwl
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Path: stage/realign-distr.cwl Branch/Commit ID: master |
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fastqPE2bam.cwl
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Path: Workflows/fastqPE2bam.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: master |
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record-output-wf.cwl
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Path: tests/record-output-wf.cwl Branch/Commit ID: main |
