Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Chunked version of phmmer-v3.2.cwl
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/phmmer-v3.2-chunked-wf.cwl Branch/Commit ID: master |
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preprocessor_for_oxog.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git
Path: preprocessor_for_oxog.cwl Branch/Commit ID: 1.0.0 |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: test |
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group-isoforms-batch.cwl
Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored. |
https://github.com/mr-c/datirium-workflows.git
Path: tools/group-isoforms-batch.cwl Branch/Commit ID: license_test |
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exomeseq-gatk4-03-organizedirectories.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: gatk4-fixes |
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qiime2 importing data
Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/bespin-workflows/16s-qiime2.git
Path: subworkflows/qiime2-01-import-data-paired.cwl Branch/Commit ID: develop |
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rRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 43d2fb8 |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 1.0.5 |
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io-int-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/io-int-wf.cwl Branch/Commit ID: main |
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HLA_LA_workflow_full.cwl
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https://github.com/mdaya/hla_la_typing.git
Path: HLA_LA_workflow_full.cwl Branch/Commit ID: master |
