Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph WGS and MT analysis for fastq files

rna / protein - qc, preprocess, filter, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl

Branch/Commit ID: f5839797da8209a9d3e441023f88130219751020
workflow graph spurious_annot

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass1.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph simple_two_step.cwl

https://github.com/NCBI-Hackathons/BLAST-Pipelines-and-FAIR.git

Path: blast-pipelines/simple_two_step.cwl

Branch/Commit ID: 9cf84946390112ca1f27347ee2a90a370a92a4a2
workflow graph delay-calibration.cwl

https://github.com/lonbar/VLBI-cwl.git

Path: workflows/delay-calibration.cwl

Branch/Commit ID: 58d6c7fe14e9a4de4e1659f8eedd2ca527c18a28
workflow graph checkm_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_checkm_wnode.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph exome alignment and somatic variant detection for cle purpose

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_cle.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph preprocessing.cwl

https://github.com/MontgomeryLab/tinyRNA.git

Path: tiny/cwl/workflows/preprocessing.cwl

Branch/Commit ID: 01509516ba001e8981df58e64eca5d1e309b758d
workflow graph tinyrna_wf.cwl

https://github.com/MontgomeryLab/tinyRNA.git

Path: tiny/cwl/workflows/tinyrna_wf.cwl

Branch/Commit ID: 01509516ba001e8981df58e64eca5d1e309b758d
workflow graph exome alignment and germline variant detection

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985
workflow graph Identifies non-coding RNAs using Rfams covariance models

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/assembly/cmsearch-multimodel-assembly.cwl

Branch/Commit ID: a83ee883bb3c7480010fa952939fac771491ddf4