Explore Workflows

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb

ChIP-seq 01 QC - reads: PE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-pe.cwl

Branch/Commit ID: c5948732a4196fcbc95633be3829c6de8809570e

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_exome.cwl

Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR.cwl

Branch/Commit ID: 4c49df49844f3e82b8fc4f30a3809ac6dc4f299a

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: a34f47d1e37af51e387ecdfa5c3047f106c1146b

ChIP-seq 01 QC - reads: SE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: 4636f2c1a8bcfceeb4b3596ee29e9c06311ed4a1

This workflow compute library complexity

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/bedtools-bam-pbc.cwl

Branch/Commit ID: bab73c25f2358d9d76ffff13eeb39a5ece38a795

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_no_trim.cwl

Branch/Commit ID: f55f0011de7db66f873ffb0f700f3fe26b33911e

https://github.com/rosafilgueira/cyclon_usecase.git

Path: run_cyclon/tracking_master.cwl

Branch/Commit ID: d6d8c3b03c66e7594561c22c1de80eda2113b277

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: 9ff3e17888a15f4691ba82380472317214e20a1c