Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	module-2.cwl	https://github.com/mskcc/Innovation-Pipeline.git Path: workflows/module-2.cwl Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf
	xenbase-chipseq-se.cwl XenBase workflow for analysing ChIP-Seq single-end data	https://github.com/datirium/workflows.git Path: workflows/xenbase-chipseq-se.cwl Branch/Commit ID: 2d00e7f29c72d33b70dcd46b58db1fc31a7f2d86
	extract_capture_kit.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 20a901f44c9fb0e6f4ee3c40ec33fa4b1c8ef005
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_index.cwl Branch/Commit ID: f4c51a054b1ec51d07d89c6a8218e610653675f3
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_mem.cwl Branch/Commit ID: f4c51a054b1ec51d07d89c6a8218e610653675f3
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 91181df8d9ef8eed9d8f40db707b9a4376fecaf5
	hisat2-stringtie_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: 4e84905f265e1db212c406d34ae4db2bf565e856
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl Branch/Commit ID: 93fbc4e51770d953fc44104a7b09436f75719470
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad