Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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record-in-secondaryFiles-missing-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/record-in-secondaryFiles-missing-wf.cwl Branch/Commit ID: ea9f8634e41824ac3f81c3dde698d5f0eef54f1b |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/datirium/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 34d0ad68878b24aa1ffd8d8b8f7b8b2f5fd82787 |
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RNA-seq (VCF) alelle specific pipeline for single-read data
Allele specific RNA-Seq (using vcf) single-read workflow |
https://github.com/datirium/workflows.git
Path: workflows/allele-vcf-rnaseq-se.cwl Branch/Commit ID: 2b8146f76595f0c4d8bf692de78b21280162b1d0 |
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fail-unconnected.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/fail-unconnected.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2 |
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prep.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target/prep.cwl Branch/Commit ID: 1e91001f761abbddeb2c9f4528ed4cec41d113f3 |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba |
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main.cwl
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https://github.com/alpha-unito/streamflow-fl.git
Path: cwl/main.cwl Branch/Commit ID: 21b6baeb5f4161a790f3b47413f55dddbc20797d |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea |
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protein annotation
Proteins - predict, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-annotation.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4 |
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cache_asnb_entries
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 4b73bfeb967ee9f57a0410276f7c39e784f0846f |
