Explore Workflows

Water body detection based on NDWI and otsu threshold

https://github.com/fabricebrito/fgb.git

Path: wrapped.cwl

Branch/Commit ID: 08b3e734aadaca3454f3b1225ad3ab76bc10e56a

Packed ID: detect_water_body

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl

Branch/Commit ID: 526f36f93655bfb098f766ff020708b5a707513a

https://github.com/dockstore-testing/tooltester-wes-testing.git

Path: nontrivial/nontrivial.cwl

Branch/Commit ID: 9db21180ef17cb71100386bdfafbf06f4cda441f

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-int-wf.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: final-workflow.cwl

Branch/Commit ID: 556884e8e205295e561b1d9140d836cdd6c1d8c9

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-blast-phobius.cwl

Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1

This workflow remove foreign chromosome comtamination from blastn TSV files

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-foreign-chromosome-cleanup.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/spaceTxConversion.cwl

Branch/Commit ID: 2e31b8ddd4d509c7bbcb983ad41e401687623ddb

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/aws_freebayes.cwl

Branch/Commit ID: 13c106834d6c9031de08496faeff521740a0c95f