Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ROSE: rank ordering of super-enhancers

Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)

 https://github.com/datirium/workflows.git

Path: workflows/super-enhancer.cwl

Branch/Commit ID: 92f1a6da9c4f85fb51340b01b32373a50fde0891
workflow graph count-lines11-extra-step-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines11-extra-step-wf.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8
workflow graph count-lines8-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41
workflow graph import_schema-def.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/import_schema-def.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8
workflow graph no-inputs-wf.cwl

Workflow without inputs.

 https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/no-inputs-wf.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8
workflow graph count-lines11-extra-step-wf-noET.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines11-extra-step-wf-noET.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18
workflow graph facets

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/facets.cwl

Branch/Commit ID: 5b6fb984f3cf8e971d677c92a096cd437f34b787
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter-wf4.cwl

Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41

Packed ID: main
workflow graph 01-qc-se.cwl

ATAC-seq 01 QC - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: 4636f2c1a8bcfceeb4b3596ee29e9c06311ed4a1