Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/ResearchObject/runcrate.git Path: tests/data/revsort-run-1/snapshot/revsort.cwl Branch/Commit ID: 33d769ba3b1086f33351f76f8db4ad841c53a69b
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9
	fastq_contamination_cleanup This workflow detect and remove contamination from a DNA fasta file	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Contamination/fastq-contamination-cleanup.cwl Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
	manta.cwl	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/subworkflows/manta.cwl Branch/Commit ID: 3441040dfaecba58150c13a95a6a93657b00778a
	Identify somatic SVs	https://github.com/ChrisMaherLab/PACT.git Path: subworkflows/sv_merge_and_filter.cwl Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
	trim-rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe.cwl Branch/Commit ID: 687116aeadebda243e8616e0eda2df4c9466c0bf
	811.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/811.cwl Branch/Commit ID: 1397d96ad97fe8abfd1184675d728a8a04699d67
	merge-bam-parallel This workflow merge BAM files per condition in parallel	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
	filtering.cwl	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/subworkflows/filtering.cwl Branch/Commit ID: 3441040dfaecba58150c13a95a6a93657b00778a
	SV Pipeline	https://github.com/ChrisMaherLab/PACT.git Path: pipelines/sv_pipeline.cwl Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f