Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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js-expr-req-wf.cwl#wf
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/js-expr-req-wf.cwl Branch/Commit ID: main Packed ID: wf |
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EMG pipeline v3.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: 1b0851e |
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count-lines17-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines17-wf.cwl Branch/Commit ID: master |
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gatk-4.0.0.0-haplotypecaller.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/gatk-4.0.0.0-haplotypecaller.cwl Branch/Commit ID: master |
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align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/align-texts-wf.cwl Branch/Commit ID: master |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 56dafa4 |
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wf_full_IDR_pipeline_1input_sample.cwl
This workflow essentially restructures the inputs before sending to wf_full_IDR_pipeline_1input.cwl |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_full_IDR_pipeline_1input_sample.cwl Branch/Commit ID: master |
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exome alignment and germline variant detection
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https://github.com/litd/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: master |
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access_qc.cwl
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https://github.com/msk-access/qc_generation.git
Path: access_qc.cwl Branch/Commit ID: develop |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: develop |
