Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Process cnvkit outputs

https://github.com/mr-c/PACT.git

Path: subworkflows/process_cnvkit_results.cwl

Branch/Commit ID: afa90537a1d7465aba5fda486d004ced7a805030
workflow graph Per-region pindel

https://github.com/mr-c/PACT.git

Path: subworkflows/pindel_cat.cwl

Branch/Commit ID: mr-c-patch-1
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/mr-c/PACT.git

Path: subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: mr-c-patch-1
workflow graph Apply filters to VCF file

https://github.com/mr-c/PACT.git

Path: subworkflows/filter_vcf.cwl

Branch/Commit ID: mr-c-patch-1
workflow graph SNV background error suppression using panel of normals

https://github.com/mr-c/PACT.git

Path: subworkflows/suppress_background_error.cwl

Branch/Commit ID: mr-c-patch-1
workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines14-wf.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de
workflow graph wf-loadContents3.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents3.cwl

Branch/Commit ID: b1d4a69df86350059bd49aa127c02be0c349f7de
workflow graph Transcripts annotation workflow

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: 72f702591368397f56d455128f60916902104dd2
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: ae57b60e9b01e3f0f02f4e828042748409dff5a3
workflow graph kmer_compare_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_compare_wnode.cwl

Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c