Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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stats.cwl
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: cwl/stats/stats.cwl Branch/Commit ID: demo |
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BD Rhapsody™ WTA Analysis Pipeline
The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file. |
https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git
Path: wf.cwl Branch/Commit ID: main Packed ID: main |
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Vegetation index
Vegetation index processor, the greatest |
https://github.com/EOEPCA/app-vegetation-index.git
Path: vegetation-index.cwl Branch/Commit ID: master Packed ID: vegetation-index |
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picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 1.0.6 |
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gk-parse-current.cwl
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https://github.com/vdikan/cwl-gk-thermal.git
Path: cwl/gk-parse-current.cwl Branch/Commit ID: master |
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ST520104.cwl
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https://github.com/Marco-Salvi/cwl-test.git
Path: wf5201/ST520104.cwl Branch/Commit ID: main |
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blast-scatter-flow-needs-work.cwl
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https://github.com/betisb/inputparser.git
Path: cwl/blast-scatter-flow-needs-work.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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https://github.com/mr-c/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-wf.cwl Branch/Commit ID: fix_sbg_namespace |
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GATK-Sub-Workflow-Workflow-h3abionet-haplotype.cwl
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https://github.com/mr-c/h3agatk.git
Path: workflows/GATK/GATK-Sub-Workflow-Workflow-h3abionet-haplotype.cwl Branch/Commit ID: cwl_v1_0 |
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sequence (bam or fastqs) to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: master |
