Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: master
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/celldive-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: cd2f15f
workflow graph Bisulfite alignment and QC

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: master
workflow graph SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination

Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs.

https://github.com/mr-c/datirium-workflows.git

Path: tools/soupx-subworkflow.cwl

Branch/Commit ID: license_test
workflow graph msi.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/subworkflows/msi.cwl

Branch/Commit ID: master
workflow graph scatter-valuefrom-wf6.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf6.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v4.0 (single end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-single.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 5dc7c5c
workflow graph env-wf2.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf2.cwl

Branch/Commit ID: main
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: master