Explore Workflows

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: develop

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/1st-workflow.cwl

Branch/Commit ID: main

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-bam.cwl

Branch/Commit ID: dev2

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/nestedworkflows.cwl

Branch/Commit ID: main

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 8515542

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

https://github.com/bespin-workflows/16s-qiime2.git

Path: subworkflows/qiime2-08-taxonomic-analysis.cwl

Branch/Commit ID: develop

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl

Branch/Commit ID: master

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: 1.0.0

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: master

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/workflow_inputs.cwl

Branch/Commit ID: main