Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bulk_process.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_process.cwl

Branch/Commit ID: bb023f9
workflow graph Varscan Workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: develop
workflow graph merge-bam-parallel

This workflow merge BAM files per condition in parallel

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/merge-bam-parallel.cwl

Branch/Commit ID: master
workflow graph metaphlan_wfl.cwl

https://github.com/stevetsa/Metaphlan-ISBCGC-Dockstore.git

Path: metaphlan_wfl.cwl

Branch/Commit ID: master
workflow graph functional analysis prediction with InterProScan

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: f993cad
workflow graph collate_unique_SSU_headers.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 43d2fb8
workflow graph test-extract_ifie.cwl

https://github.com/kyusque/abmp_log_dump2pieda.git

Path: test-extract_ifie.cwl

Branch/Commit ID: master
workflow graph wf-variantcall.cwl

https://github.com/bcbio/test_bcbio_cwl.git

Path: prealign/prealign-workflow/wf-variantcall.cwl

Branch/Commit ID: master
workflow graph pindel parallel workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: No_filters_detect_variants