Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph merge and annotate svs with population allele freq and vep

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/merge_svs.cwl

Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 641083e9ed933d388f36fa04c00c20a810599e94
workflow graph SV filtering workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_sv_vcf.cwl

Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
workflow graph workflow_neuroproof_train.cwl

local

 https://github.com/aplbrain/saber.git

Path: saber/i2g/examples/I2G_Neuroproof/workflow_neuroproof_train.cwl

Branch/Commit ID: 051b9506fd7356113be013ac3c435a101fd95123
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
workflow graph Apply filters to VCF file

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/filter_vcf.cwl

Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
workflow graph Varscan Workflow

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
workflow graph mutect parallel workflow

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/mutect.cwl

Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
workflow graph workflow_demultiplexing.cwl

https://git.wageningenur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_demultiplexing.cwl

Branch/Commit ID: b9097b82e6ab6f2c9496013ce4dd6877092956a0