Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph fail-wf.cwl

Run failtool which will fail

 https://github.com/Duke-GCB/calrissian.git

Path: input-data/fail-wf.cwl

Branch/Commit ID: 4fd8e7dbcff5492cb32e4fb15263a51fa4490cf1
workflow graph EMG assembly for paired end Illumina

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a
workflow graph io-union-input-default-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/io-union-input-default-wf.cwl

Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
workflow graph rna_seq_workflow_2.cwl

https://github.com/skanwal/novice-tutorial-exercises.git

Path: rna_seq_workflow_2.cwl

Branch/Commit ID: dcdce1d1af183b4f908bea685e90fb2d87aeec21
workflow graph varscan somatic workflow

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/varscan.cwl

Branch/Commit ID: 656d9ae18f164f983c5672bcf51037cd73309f4f
workflow graph virify

https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/pipeline.cwl

Branch/Commit ID: aad5474411ea31449b3e8a26eeed8920dd07fa17
workflow graph preparation_workflow.cwl

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: utils-cwl/subworkflow/preparation_workflow.cwl

Branch/Commit ID: 138d484362084dfc97d9fb7d839855b4bc2c5599
workflow graph Subsample BAM file creating a tagAlign and pseudoreplicates

This workflow creates a subsample from a BAM file creating a tagAlign and pseudoreplicates

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/subample-pseudoreplicates.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
workflow graph module-4.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/module-4.cwl

Branch/Commit ID: 3441040dfaecba58150c13a95a6a93657b00778a
workflow graph canine_mutect2_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_mutect2_module.cwl

Branch/Commit ID: 462aaebbd442e84ea101b45b716df0174b88512e