Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwlprov.git

Path: examples/revsort-run-1/snapshot/revsort.cwl

Branch/Commit ID: 845196b7c34a965b3c86dd4aaf25eaf1181c4fbc
workflow graph format_rrnas_from_seq_entry

https://github.com/ncbi/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757
workflow graph qc.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/qc.cwl

Branch/Commit ID: e7f46046a7338b6a2bb914e263278ea9c0207326
workflow graph bam_readcount workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph spaceTxConversion.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/spaceTxConversion.cwl

Branch/Commit ID: e7f46046a7338b6a2bb914e263278ea9c0207326
workflow graph cellpose.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/cellpose.cwl

Branch/Commit ID: e7f46046a7338b6a2bb914e263278ea9c0207326
workflow graph psortedDefaultParams.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/psortedDefaultParams.cwl

Branch/Commit ID: e7f46046a7338b6a2bb914e263278ea9c0207326
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: ae57b60e9b01e3f0f02f4e828042748409dff5a3
workflow graph processing.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/processing.cwl

Branch/Commit ID: e7f46046a7338b6a2bb914e263278ea9c0207326