Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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mut3.cwl
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![]() Path: tests/wf/mut3.cwl Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883 |
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umi molecular alignment workflow
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![]() Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a |
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Add snv and indel bam-readcount files to a vcf
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![]() Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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count-lines7-wf.cwl
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![]() Path: v1.0/v1.0/count-lines7-wf.cwl Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e |
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Filter single sample sv vcf from depth callers(cnvkit/cnvnator)
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![]() Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: 258bd4353ad1ca7790b3ae626bf42ab8194e7561 |
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Unaligned to aligned BAM
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![]() Path: definitions/subworkflows/align.cwl Branch/Commit ID: 22fce2dbdada0c4135b6f0677f78535cf980cb07 |
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gathered exome alignment and somatic variant detection
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![]() Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
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count-lines12-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 20d664eff23e59aa57908345bfdb1ceeab3438f2 |
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sum-wf.cwl
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![]() Path: tests/sum-wf.cwl Branch/Commit ID: 50251ef931d108c09bed2d330d3d4fe9c562b1c3 |
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umi duplex alignment workflow
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![]() Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |