Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wf_run_use_case.cwl
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https://github.com/BAMresearch/NFDI4IngScientificWorkflowRequirements.git
Path: simple_use_case/cwl/wf_run_use_case.cwl Branch/Commit ID: feature/latex-prep-job |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/DataBiosphere/toolbox.git
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.30.0 |
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03-map-se.cwl
ATAC-seq 03 mapping - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: master |
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status_postgres_workflow.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/status/status_postgres_workflow.cwl Branch/Commit ID: 1.1 |
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chksum_xam_to_interleaved_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_xam_to_interleaved_fq.cwl Branch/Commit ID: 0.4.0 |
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bwa_mem
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bwa_mem.cwl Branch/Commit ID: 1.0.9 |
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scatter-valuefrom-wf4.cwl#main
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-valuefrom-wf4.cwl Branch/Commit ID: main Packed ID: main |
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Whole Exome Sequencing
Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow Packed ID: main |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 5833078 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/visium-pipeline.git
Path: pipeline.cwl Branch/Commit ID: main |
