Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/david4096/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: dev |
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status_postgres_workflow.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/status/status_postgres_workflow.cwl Branch/Commit ID: 1.1 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 5833078 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: dev |
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prok-annotation-cheetah.cwl
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https://github.com/mr-c/GALES.git
Path: cwl/workflows/prok-annotation-cheetah.cwl Branch/Commit ID: upgrade-test |
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pcawg_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: pcawg_annotate_wf.cwl Branch/Commit ID: develop |
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completeWorkflow.cwl
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https://github.com/h3abionet/h3abionet16S.git
Path: workflows-cwl/completeWorkflow.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: assembly |
