Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/bam_filtering.cwl Branch/Commit ID: 3bb03c9b |
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Varscan Workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: master |
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qiime2 demux paired sequences
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https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-02-demux-emp-paired.cwl |
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search.cwl#main
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/search.cwl Branch/Commit ID: master Packed ID: main |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: caea457 |
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Optical throughput measurements via muon ring analysis
Upon receiving a new DL0 data product (from either Monte Carlo simulations or observations), DPPS triggers the CalibPipe (ctapipe-process) to process the data using ctapipe, extracting the signal charges and reconstructing muon parameters. The second step involves using the CalibPipe tool to estimate the telescope’s optical throughput using a predefined number of muon events. |
https://github.com/burmist-git/076_cwl.git
Path: uc-120-2.2-optical-throughput-calibration-with-muons.cwl Branch/Commit ID: master |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/DataBiosphere/topmed-workflows.git
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.19.0 |
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wf.cwl
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https://github.com/MarkRobbo/subworkflow-test.git
Path: NF_Hello/wf.cwl Branch/Commit ID: master |
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wf.cwl#UncompressDatatables.cwl
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https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git
Path: wf.cwl Branch/Commit ID: main Packed ID: UncompressDatatables.cwl |
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ocrevaluation-performance-test-files-wf-pack.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/ocrevaluation-performance-test-files-wf-pack.cwl Branch/Commit ID: master Packed ID: main |
