Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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Create Genomic Collection for Bacterial Pipeline, ASN.1 input
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https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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call_cnv.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/subworkflows/call_cnv.cwl Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: ae79bc51e8b502164dbe74ea3b068d6d4d36a1f8 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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Run genomic CMsearch
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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fillout_pre_processing.cwl
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https://github.com/mskcc/pluto-cwl.git
Path: cwl/fillout_pre_processing.cwl Branch/Commit ID: 59b69eed7ffefcffd81313ec8ffb84c0d716b933 |
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prefetch_fastq.cwl
Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd |
https://github.com/svonworl/bio-cwl-tools.git
Path: sratoolkit/prefetch_fastq.cwl Branch/Commit ID: 9d4e46105a269408469d9047be271da5be8de87a |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
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format_rrnas_from_seq_entry
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https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b |
