Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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SPRM pipeline
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https://github.com/hubmapconsortium/sprm.git
Path: pipeline.cwl Branch/Commit ID: dd8c266 |
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io-union-input-default-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/io-union-input-default-wf.cwl Branch/Commit ID: master |
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lobSTR-workflow.cwl
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https://github.com/common-workflow-language/workflows.git
Path: workflows/lobSTR/lobSTR-workflow.cwl Branch/Commit ID: 17b65ea19d81527090fded62ffa0e1ba3b25d56 |
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EMG pipeline v4.0 (paired end version)
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-paired.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 8e196ab |
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wf_clipseqcore_pe_1barcode.cwl
Workflow for handling reads containing one barcode. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_pe_1barcode.cwl Branch/Commit ID: master |
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Unaligned BAM to BQSR and VCF
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https://github.com/MarkRobbo/workflows.git
Path: workflows/hello/exome_alignment_packed.cwl Branch/Commit ID: master Packed ID: workflow.cwl_2 |
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varscan somatic workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/varscan.cwl Branch/Commit ID: toil_compatibility |
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LSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: 5dc7c5c |
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wf_wrapper_paleocar.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/wrapper_paleocar/wf_wrapper_paleocar.cwl Branch/Commit ID: master |
