Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Viral contig assign

https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/Tools/Assign/assign_swf.cwl

Branch/Commit ID: ff0992ba5374a5c969c39c12a769663a63de708e
workflow graph workflow.cwl

Implementing bamqc over and over again to get an idea of how easy or hard it is for a beginner to implement a basic workflow in different workflow systems.

https://github.com/garyluu/one-workflow-many-ways.git

Path: cwl/workflow.cwl

Branch/Commit ID: ceec932ee375423f7ee6ac28248c829909ad6927
workflow graph ViPhOG annotations

\"Run viral_contigs_annotation.py on an array of files\"

https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/Tools/Annotation/viral_annotation_swf.cwl

Branch/Commit ID: 95c467f65a19b6e6e2522bfcd6d25b3e4370a905
workflow graph assembly-wf-virus.cwl

https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git

Path: Assembly/workflow/assembly-wf-virus.cwl

Branch/Commit ID: 1fa429bde1fa7cb801cd1a51e31098f1e736f4c9
workflow graph runCRISPRCasFinder

Implementation of CRISPRCasFinder processing.

https://github.com/EBI-Metagenomics/CRISPRCasFinder-CWL.git

Path: src/workflows/runCRISPRCasFinderl.cwl

Branch/Commit ID: e0974da2e40f685b50dd38a5a01fd8ef26aba9b9
workflow graph presto.cwl

https://github.com/eosc-lofar/presto-cwl.git

Path: presto.cwl

Branch/Commit ID: 59d9428661aed849cdeac8ffc773735b9ee15f9d
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
workflow graph tRNA_selection.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
workflow graph rRNA_selection.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de