Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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Unaligned bam to sorted, markduped bam
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 31a179d7a2f2ac86bfd7fcc4dc79832c3739ae76 |
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STAR-RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq_star_fusion.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 31a179d7a2f2ac86bfd7fcc4dc79832c3739ae76 |
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Detect Variants workflow for WGS pipeline
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
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Downsample and HaplotypeCaller
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: 5be54bf09092c53e6c7797a875f64a360d511d7f |
