Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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WGS processing workflow for single sample
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https://github.com/arvados/arvados-tutorial.git
Path: WGS-processing/cwl/helper/bwamem-gatk-report-wf.cwl Branch/Commit ID: 2691061efa8341166ad6518688e5e6c0fb9a8fbf |
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pdf2wordcloud.cwl
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https://github.com/wilke/CWL-Quick-Start.git
Path: CWL/Workflows/pdf2wordcloud.cwl Branch/Commit ID: ea282b81f959350ef77263baa7c0b8e1383632ad |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: a3affd1b9e3e16f0644a25fee1a7b87b99df57b0 |
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exome alignment and somatic variant detection for cle purpose
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05 |
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sequence (bam or fastqs) to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_trimmed_fastq.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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fp_filter workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199 |
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WGS QC workflow nonhuman
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05 |
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xbrain.cwl
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https://github.com/elenimath/saber.git
Path: saber/xbrain/workflows/xbrain.cwl Branch/Commit ID: master |
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alignment_novoalign.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_novoalign.cwl Branch/Commit ID: 13c106834d6c9031de08496faeff521740a0c95f |
