Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: c00944bae1a9d0f726f271786dae5454aa36f6e1
	bacterial_orthology	https://github.com/ncbi/pgap.git Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19
	foreign_screening.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 7319ccfd2108929588bdc266d9df198629dfaa65
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 3897218b16b30a933beecd60a98a300d677207d8
	Compute library complexity This workflow compute library complexity	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: f9447c1ac522e17531097c93a169a1a31453e874
	magicblast-alignment-pe This workflow aligns the fastq files using magicblast for paired-end samples	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/magicblast-alignment.cwl Branch/Commit ID: 11f70a71cb68b3960c2d410ba1fdcd3b8a7e1419