Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow to allow calling cnvkit with cram instead of bam files	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
	qc-assembled.workflow.cwl	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/qc-assembled.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6
	scatter-valuefrom-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf3.cwl Branch/Commit ID: 6003cbb94f16103241b562f2133e7c4acac6c621 Packed ID: main
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
	merge-bam-parallel This workflow merge BAM files per condition in parallel	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 33123d6a92bf0038951820d0d2c9cf501ae2ebf6
	Replace legacy AML Trio Assay	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
	Sounder SIPS L1A PGE Processes Sounder SIPS L0 products into L1A products	https://github.com/unity-sds/unity-sps-workflows.git Path: sounder_sips/l1a_package.cwl Branch/Commit ID: d08e59ccfedba6cf4606a9317900754790f1447e Packed ID: main
	Functional analyis of sequences that match the 16S SSU	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: c2110714be230861ee7b96adc3db6e32e5248c57
	Water body detection based on NDWI and otsu threshold Water body detection based on NDWI and otsu threshold	https://github.com/fabricebrito/fgb.git Path: wrapped.cwl Branch/Commit ID: 08b3e734aadaca3454f3b1225ad3ab76bc10e56a Packed ID: detect_water_body